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Science
07 January 2025

New Study Links Circadian Clock Gene To Gut Microbiome Stability

Research reveals the role of 'period' gene in regulating bacterial composition and daily loads within Drosophila melanogaster.

The circadian clock gene period influences the gut microbiome composition and daily bacterial levels in Drosophila melanogaster.

A recent study has unveiled pivotal insights about how the circadian clock gene, known as period (per), shapes the gut microbiome of the fruit fly Drosophila melanogaster, indicating significant differences between wild-type flies and those carrying mutations affecting their circadian rhythms. Conducted at the University of Padova and the University of Leicester, this research examined gut microbiota from D. melanogaster reared under controlled light-dark cycles versus constant darkness.

Building upon the growing evidence of how the circadian clock impacts various physiological processes, the study focused on whether and how the per gene modulates gut microbial populations. The researchers found marked variations between the gut microbiota of wild-type flies and those with the per01 mutation, which disrupts their circadian rhythms.

Under the standard 12:12 light-dark regime, significant daily oscillations were absent in the microbiota of wild-type flies. Conversely, per01 mutants displayed substantial daily variations, indicating the per gene's role in maintaining stability within gut bacterial communities.

According to the researchers, "We found significant daily variations in bacterial abundances, with low microbiota loads at ZT/CT 18, under both 12:12 LD and DD conditions." This suggests the per gene is involved not only in circadian regulation but also plays a part in the overall health of the gut microbiome.

Throughout their examination, the researchers noted some bacterial species exhibiting fluctuations independent of the host's circadian rhythm, hinting at the possibility of intrinsic circadian mechanisms within gut bacteria themselves. They mentioned, "Surprisingly, certain gut commensal bacteria may possess host-independent circadian clocks." This finding opens new avenues for exploration, emphasizing the complexity and interdependence of host microorganisms.

The study's findings contribute to the broader scientific dialogue on how disruptions to circadian rhythms could impact gut health, with potential relevance to various human health conditions associated with dysbiosis—an imbalance of gut microbiota—such as obesity and metabolic disorders. Understanding these dynamics could prove pivotal not only for basic science but also for developing therapeutic strategies.

With this compelling evidence on the relationship between circadian genes and gut microbiota, the authors encourage future research to determine whether these insights apply universally across other species and how host-microbe interactions could be optimized for improved health.