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19 October 2024

AI Innovations Propel Cancer Diagnostics Forward

Cofactor Genomics and UCLA lead groundbreaking studies for improved cancer detection and treatment

Advancements in cancer diagnostics and treatment are making headlines, thanks to the integration of technologies like artificial intelligence (AI) and innovative approaches to patient care. Recently, Cofactor Genomics, Inc., a clinical-stage company based out of Saint Louis, celebrated significant progress when they announced Medicare coverage for OncoPrism®, their machine learning-based RNA oncology test. This test predicts how patients with recurrent and metastatic head and neck squamous cell carcinoma (RM-HNSCC) might respond to immunotherapy.

OncoPrism utilizes high-dimensional RNA-based Health Expression Models (HEMs) to assess the tumor immune profile of patients. Jarret Glasscock, CEO of Cofactor Genomics, described the breakthrough as, "a win for all those working tirelessly to bridge the precision medicine gap in immunotherapy." He emphasized how the accurate prediction of immunotherapy responses leads to improved treatment prioritization and, eventually, enhanced patient outcomes.

The Medicare decision to cover OncoPrism is pivotal, particularly as it pertains to patients considering immune checkpoint inhibitors (ICIs). ICIs are increasingly popular due to their promise but come with no guarantees of effectiveness for all patients. The OncoPrism test not only prepares patients for potential immunotherapy but also encourages healthcare providers to make well-informed clinical decisions.

Cofactor’s initiative does not end here; their capabilities are set to be evaluated through the PREDAPT study, which encompasses eleven different solid tumors. Beginning to understand how tumors interact with immunotherapy can lead to substantial advancements not just for RM-HNSCC patients, but for all cancer patients who might benefit from similar cutting-edge technologies.

Meanwhile, at the University of California, Los Angeles (UCLA), researchers are taking their own strides toward revolutionizing cancer diagnostics. Their focus? Developing a same-day cancer cell detection system using cerebrospinal fluid (CSF). Leptomeningeal disease (LMD) — when cancer cells infiltrate the CSF around the brain and spinal cord — presents serious complications. Currently, patients often face long waits for diagnosis, with many tests taking one to two weeks for results.

Dr. Won Kim, who is co-investigators with Dr. Daniel Kamei on this UCLA project, explained the urgency, stating, "You can’t wait a month or two to establish a diagnosis or see if treatment is working." LMD’s median survival rate is shockingly low, compelling researchers to fast-track improvements to current diagnostic methods.

The planned solution is to develop a cost-effective, paper-based point-of-care test. Picture the simplicity of at-home COVID tests or pregnancy tests but targeted at detecting cancer cells within the cerebrospinal fluid. The vision is to provide doctors with results on the same day they conduct the tests, significantly shortening the often agonizing waiting period for patients.

Developing such tests, of course, is not without challenges. Detecting tiny concentrations of cancer cells and providing quantitative results rather than merely positive or negative findings is central to the research. Kamei, who has experience creating such diagnostic tools, shares optimism: “The infrastructure is there to mass-produce these types of paper-based diagnostics with low cost and high shelf life.” Currently, the work is supported by notable funding from the National Institutes of Health, which is emblematic of the increasing priority placed on quick and effective diagnostic methodologies for cancer.

Finally, another spotlight falls on the intriguing field of long non-coding RNas (lncRNAs). Often dubbed the "dark genome," lncRNAs do not encode proteins themselves but play significant roles in gene regulation and cellular functions. Research around these molecules is gaining momentum, as they offer insights not only for cancer but also for other diseases like obesity and diabetes. They stand to become foundational to future diagnostic and therapeutic efforts alongside the advances made by AI and machine learning.

Via innovative diagnostic technologies, dedicated research teams are paving the way forward. The collaborative efforts of teams across companies and universities represent the kind of response the cancer community desperately needs. Addressing healthcare’s pressing challenges with technological prowess is not just about creating new treatments; it's about enhancing quality of care, offering hope where none existed, and allowing patients to take your health decisions back to their own hands.

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